Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSYHVAVVGATGAVGTQMIELLEEAATFKIKQVSFLSSIRSAGKKLSFRGEEVTIQEATPESFEGVDIALFSAGGSVSKALAKEAVKRGAIVIDNTSAYRMDPTVPLVVPEVNEKALFS--HNGIIANPNCSTIQMVAALEPIREAFGLNRIIVSTYQAVSGSGVSAIQELKDGSKAVLDNKEFTPQI----MPVKGDKKHYPIAFNALPQIDVFT--ENDYTYEEMKMINETKKIMEDNTIKVSATCVRIPVVSGHSESVYIEVDKEGITAKEIQNALKNAPGIVLEDDPANQVYPQAVQAAGKKEVFVGRIRADID--DPKGFHMWIVSDNLLKGAAWNSIQIAESLVKLAII |
| 3TZ6 Chain:A ((1-342)) | ---GLSIGIVGATGQVGQVMRTLLDE-RDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQP-LSPERARELLDGATGVQLVD------VPTPLAAAGVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157605 for 2951 contacts (-53.4/contact) +
2D Compatibility (PS) -35608 + (NN) -14538 + (LL) 1184
1D Compatibility (HY) -19600 + (ID) 6850
Total energy: -233017.0 ( -78.96 by residue)
QMean score : 0.565
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