Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
2XUL Chain:E ((1-112))
---MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTE----SEYTVEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI------
General information:
TITO was launched using:
RESULT:
Template:
2XUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53339 for 706 contacts (-75.6/contact) +
2D Compatibility (PS) -11708 + (NN) -5353 + (LL) 208
1D Compatibility (HY) -5200 + (ID) 1950
Total energy: -77342.0 ( -109.55 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_2XUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XUL-query.scw
PDB file :
Tito_Scwrl_2XUL.pdb
: