Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIEGASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMD---MPDAEENLNEFKTKIAE---DIPVFPISAVTKTGLRELLLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD |
1PUI Chain:A ((11-198)) | ----------------------------------------------------------------------------------------------------------------------------------------------FVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQQL----INLFEVADGKRLVD-----------LPGYGEMKRKWQRALGEYLEKRQSLQGLVVLMDIR----HPLKDLDQQMIEWAVDSNI-----AVLVLLTKADKLASGARKAQLNMVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFS---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99291 for 1253 contacts (-79.2/contact) +
2D Compatibility (PS) -17702 + (NN) -3691 + (LL) 15228
1D Compatibility (HY) -3200 + (ID) 1350
Total energy: -110006.0 ( -87.79 by residue)
QMean score : 0.532
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