Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVGVPKEIKNNENRVAMTPASVFSYVNAGHTVYVEKDAGIGSNYQDADFVQAGAKIVETAKEAWD-VDMVVKVKEPIAS-----EYTYFKEGLLLFTYL-HLANEPTLAKALMESKVNSVAYETVELAD--HTLPLLSPMSEVAGRMAAQIGAQFLQRTNGGMGVLLGGVPGVERSEVVIIGGGIAGTNAAKIAAGLGANVTILDMNLKRLRELDDIFGNQVQT----LMSNDFNIETA------VKKADLVIGAVLIPGAKAPKLVKEHVVKQMIPGSVLVDIAIDQGGIFETTDHVSTHDNPTYEKYGVLHYAVANMPGAVPRTSTLALTNATLPFGLKLANQGLEAAVQNDPFLLRGLNTYQGHITYKAVADSLDLPYTDSKELI |
| 2FSV Chain:A ((1-299)) | MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVV-EALTKRKITAYAMELMPRISRAQSMNILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVP---PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGG-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FSV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149362 for 2079 contacts (-71.8/contact) +
2D Compatibility (PS) -28468 + (NN) -734 + (LL) 5976
1D Compatibility (HY) -16800 + (ID) 4750
Total energy: -194138.0 ( -93.38 by residue)
QMean score : 0.356
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