Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFFLLFLVLTLLVVMPLLIAEFVIGRGSG----GDAVQAYKTLAPGTKWSLLGKLGVVGASILFSFYSVVGGWIITYLIKTLAGGIA--GENQASLLHDFQ--------VTTANPWI---SVGATILFIL---LNVIVISRGVVSGIEKMSKFMMPALFILFIVLIIRS--LTLPG--AMEGVAFFLRPDFSHFTAQTVLI-TLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAI-FPAAFSF----NITPDAGPG---LLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNA-GVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIILPVGALFIAIFVGYRLPRELLLKEFTTSSHFGKKVFIVWLFLIKYIAPIAIILVFLSATGLIDFLF |
3MPQ Chain:A ((1-399)) | ---KREHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEP--DPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFCLAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRKHAVLWTAAIVFFSA-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MPQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -375944 for 2984 contacts (-126.0/contact) +
2D Compatibility (PS) -36077 + (NN) -12747 + (LL) 9504
1D Compatibility (HY) -39600 + (ID) 6000
Total energy: -460864.0 ( -154.45 by residue)
QMean score : 0.364
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