Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKKPLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQIASMNRTLNADIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNKAVQAKFK
1VLH Chain:B ((15-169))-----AVYPGSFDPITLGHVDIIKRALSIFDELVVLVTENPRKKCMFTLEERKKLIEEVLSDLDGVKVDVHHGLLVDYLKKHGIKVLVRGLRAVTDYEYELQMALANKKLYSDLETVFLIASEKFSFISSSLVKEVALYGGDVTEWVPPEVARALNEKLK


General information:
TITO was launched using:
RESULT:

Template: 1VLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107307 for 1202 contacts (-89.3/contact) +
2D Compatibility (PS) -16884 + (NN) -7802 + (LL) 228
1D Compatibility (HY) -18800 + (ID) 4050
Total energy: -154615.0 ( -128.63 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_1VLH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VLH-query.scw
PDB file : Tito_Scwrl_1VLH.pdb: