Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVLFHHLKKYKLQATLSTLFVVVMVISQLWQPKLLQQVLDAIMKDDMDEISSIGALLIGIAAVGLIAGILNTILSAKVAQGVGADIRESSFRKIQTFSFSNIEKLSTGNLVVRQTNDITQVQNLVMLSLQSLTRIPIMFIGAFILAMFTLPELWWVIIVLVVLVVLIVVFTFGSMGKHFAIIQKLIDRVNSIAKENLAGMRVVKSFVQEDNEIGRFTTVSDKLTRHTIIVGTLFSVMIPAFMLVSNLAIVVSIFFVGDMAADNPEVIGAIASFMNYLMQIMMAIIIGGMLMMMASRALISLKRITEVLETEPDITYNENAPEQDLEGTVEFRNVSFKYDGDDTPALEDISFKASVGEMVGIVGATGSGKSTLAQLIPRLYDPTEGEVIIGGTNLKDINKKTLRSTVSFVLQRAILFSGTIADNLRHG-KKDATAEEMEHASKIAQAKEFIDKQAKLYEAPVSERGNNFSGGQKQRLSITRGVIGSPKVLILDDSTSALDAKSEKLVKEALNKELDDTTTFIIAQKISSVIQADKILVLDKGKLVGVGSHKELLKENETYREIYDTQKGKEVTA |
| 1MV5 Chain:A ((5-231)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RHVDFAYD-DSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIRENLTYGLEGDYTDEDLWQVLDLAFARSFVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQKALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELVATHPLY-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62897 for 1709 contacts (-36.8/contact) +
2D Compatibility (PS) -24937 + (NN) -12190 + (LL) 32868
1D Compatibility (HY) -20800 + (ID) 4400
Total energy: -92356.0 ( -54.04 by residue)
QMean score : 0.488
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