Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------MRVSQTYGLVLYNR-NYREDDKLVKIFTETEGKRMFFVKHASKSKFNAVLQP--LTIAHFILKINDNGLSYIDDYKEVLAFQETNSDL---FKLSYASYITSLAD----VAISDNVA---DAQLFIFLKKTLELIEDGLDYEILT-------NIFEVQLL----ERFGVALN-----------FHDCVFCHRVG--LPFDFSHKYSGLLCPNHYYKDE--------------RRNHLDPNMLYLINRFQSIQF---DDLQTIS-VKPEMKLKIRQFLDMIYDEYVGIHLKSKKFIDDLSSWGSIMKSD--------------- |
| 4OV4 Chain:A ((23-408)) | PKTIHIQDVTLRDGNQALKRPWTIDEKIEVFDLLVELNVDGIEVGFPSSNETEFHTCQVLSKRAPKGKPIAALSRANQNEIAVTWEAIQKADCPRMHIVYPVSDFSIKHVLKISEKEVLQKIRNSISFARSIVGPGIEIQFSGEHFGDAIENFAFTKEAFLTAIEAGANIINLPNTVERYRPMVFVNMVKEIKDVVKDKAIISIHTHNDLGMATATSVESVYVGAEQIEVALNGLGERAGNTNLYETAIALHQNGENLNINFQRIYPTAKRISELTGIPIGEKTPIIGEDIFSHRSGIHQHQSKGAYRTFSPEFVGRMDKETISFTNQSGHKAIEFLLHQR-----GIQVSKEGIHHLFSLAKSISSRENNREITEAELVALSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66251 for 1593 contacts (-41.6/contact) +
2D Compatibility (PS) -25900 + (NN) -7004 + (LL) 404
1D Compatibility (HY) -2400 + (ID) 2400
Total energy: -103551.0 ( -65.00 by residue)
QMean score : 0.195
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