Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAAKKTHKTAVVVHGFANSKENMKAYGWLFHKLGYNVLMPDNIAHGESHGQLIGYGWNDRENIIKWTEMIVDKNPSSQITLFGVSMGGATVMMASGEKLPSQVVNIIEDCGYSSVWDEL---KFQA----K----E----------MYGLPAFPL---LY--EVSTISK--I-------RAGF-SY---GQASSVEQLKKNNLPALFIHGDKDNFVPTSMVYDNYKATAGKKELYIVKGAKHAKSFETEPEKYEKRISSFLKKYEK |
| 2XMZ Chain:A ((1-265)) | --------------------------------------------------------------------------MTHYKFYEANVETNQVLVFLHGFLSDSRTYHNHIEKFT-DNYHVITIDLPGHGEDQSSMDE-T-WNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAI-NGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPHKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFV-QIAKKMANLIP-NSKCKLISATGHTIH-VEDSDEFDTMILGFLKEEQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56319 for 1872 contacts (-30.1/contact) +
2D Compatibility (PS) -24014 + (NN) -7953 + (LL) 6792
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -92194.0 ( -49.25 by residue)
QMean score : 0.317
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