Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------MKNSLQKLRKSRKLSQAELAVALGVTRQT-IISLEKEKYTASLELAFKIARYFDKQIEEVFIYTESERG------------------------------------------------------------------------------------------------------ |
1Y9Q Chain:A ((4-181)) | TDVMFKSQIANQLKNLRKSRGLSLDATAQLTGVSK-AMLGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYIHVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAVFQNIVAYPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -26160 for 439 contacts (-59.6/contact) +
2D Compatibility (PS) -7229 + (NN) -3533 + (LL) 120
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -39652.0 ( -90.32 by residue)
QMean score : 0.544
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