Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRIKDYADSLGVSSQSIYKRIRSPKYKERLKGHLYRDNQKVENLDLIGIKILEDYHFENDVIELEKTLGDIQEEFEQEKKGMQYRIDRLADKLTPLLEDNQNLVQKNYELLNYVRSLERQKLLLIIALAVMVITLLVAIWLAIF
2YDF Chain:B ((372-409))---------------------------------------------------------------------------------------KVFDEFKPLVEEPQNLIKQNCELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSR


General information:
TITO was launched using:
RESULT:

Template: 2YDF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) 4302 for 160 contacts (26.9/contact) +
2D Compatibility (PS) -4071 + (NN) -1893 + (LL) 6228
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -884.0 ( -5.53 by residue)
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_2YDF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YDF-query.scw
PDB file : Tito_Scwrl_2YDF.pdb: