Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNDFHHITVLLHETVDMLD--IKPDGIYVDATLGGAGHSEYLLSQLGPDGHLYAFDQDQKAIDNAHIRLKKYVDTGQVTFIKDNFRNLSSNLKALGVSEINGICYDLGVSSPQLDERERGFS-YKQDAPLDMRMNREQSLTAYDVVNTYSYHDLVRIFFKYGEDKFSKQIARKIEQVRAEKPISTTTELAEIIKSSKSAKELKKKGHPAKQIFQAIRIEVNDELGAADESIQQAMDLLAVDGRISVITFHSLEDRLTKQLFKEASTVEVPKGLPFIPDDLQPKMELVNRKPILPSQEELEANNRAHSAKLRVARRIR |
| 4PON Chain:A ((7-197)) | -----MILKKILPYSKELLKMAAGEGDIVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEAYQA-RTTLFHKSHDKIAKSLPPETHGKVAAAVFNLGNGSSTIKAIEQLLSIMKDEGLIVLVVYHGNDVLDF--CRNLDQQAARVLTYGFINQQNDPPFIVAIEKKAQ------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60237 for 1311 contacts (-45.9/contact) +
2D Compatibility (PS) -18058 + (NN) -4441 + (LL) 10848
1D Compatibility (HY) -9200 + (ID) 1450
Total energy: -82538.0 ( -62.96 by residue)
QMean score : 0.352
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