Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITKFPDQWQDKLTQRQFDDLTDIQNKLFQAITDG--DNILGISPTGTGKTLAYLFPTLLKLQP-KKSQQLLILAPNSELAGQIFDVTKEWAEPLGL-TAQLFLSGSSQKRQIERLKKGPEILIGTAGRVFELVKLK-KIKMMNINTIVLDEFDELLGDS-QYHFVDNIINRVPRDQQMIYISATNKLDNSKLAD------NTITIDLSDQKLDTIKHYYITVDK-RERTDLLRKFSN-IPDFRGLVFFNSLSDLGACEERLQFNRASAVSLASDINIKFRKVILEKFKNHDISLLLGTDLVARGIDIDNLEYVINFDIA------RDKETYTHRSGRTGRMGKEGCVITFVTHKEELKQLKKYATVAELVLHNQKLHLK |
| 3FHT Chain:A ((32-396)) | ----LKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGN---KLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -178774 for 2900 contacts (-61.6/contact) +
2D Compatibility (PS) -37333 + (NN) -14836 + (LL) 1008
1D Compatibility (HY) -22800 + (ID) 4800
Total energy: -257535.0 ( -88.81 by residue)
QMean score : 0.533
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