Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
4UOF Chain:C ((4-134))
-ERTFIAVKPDGVQRGLIGEIIKRFEAKGFKLAGMKYIQASEDLLKQHYIDLADKPFYPGLCKYMSSGPVVAMCWEGTGVVKTARVMMGETRPADSKPGTIRGDFC-----IEVGRNIIHGSDSVESANKEIALWFKP
General information:
TITO was launched using:
RESULT:
Template:
4UOF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66817 for 1008 contacts (-66.3/contact) +
2D Compatibility (PS) -13961 + (NN) -4902 + (LL) 164
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -102566.0 ( -101.75 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_4UOF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UOF-query.scw
PDB file :
Tito_Scwrl_4UOF.pdb
: