Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPFVKIDLFEGRSQEQKNELAREVTEVVSRIAKAPKENIHVFINDMPEGTYYPQGELKKK
2X4K Chain:B ((3-57))
MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSD
General information:
TITO was launched using:
RESULT:
Template:
2X4K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16982 for 279 contacts (-60.9/contact) +
2D Compatibility (PS) -6096 + (NN) -3920 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -32948.0 ( -118.09 by residue)
QMean score : 0.727
(partial model without unconserved sides chains):
PDB file :
Tito_2X4K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X4K-query.scw
PDB file :
Tito_Scwrl_2X4K.pdb
: