Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKMIVIACNTATAVAWQEIKEKL-DIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVG-KLDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQEINVERIVL
3OUT Chain:A ((5-261))
LDNRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSLVD---NLNTVGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSYFHDKNIQALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTT-K-NPEYRFYVTDIPLKFRSVGEMFL--QTEMQHLEI
General information:
TITO was launched using:
RESULT:
Template:
3OUT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -235248 for 2301 contacts (-102.2/contact) +
2D Compatibility (PS) -27112 + (NN) -7927 + (LL) 336
1D Compatibility (HY) -22000 + (ID) 4800
Total energy: -296751.0 ( -128.97 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3OUT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OUT-query.scw
PDB file :
Tito_Scwrl_3OUT.pdb
: