Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIVVALGGNALGNSPE-----EQLRLVKHTAKSLVALIKKGHEIVVSHGNGPQVGAINLGMNFAAESGQGTNFPFPECGAMSQGYIGYHLQQSLLNELRQEGINKEVATIITQIEVDESDQAFSAPTKPIGTFYDKETSEK----------IAIEKGYTFVEDAGRGYRRVVASPEPKKIIEINSIKTLIENDTLVIAGGGGGIPVIN-KGGYEGIAAVIDKDKSSALLAGELAADQLIILTAVDY--VYTQFGKENQKALTEVNENQMIDYVNQGEFAKGSMLPKVIACMSFLDHNPKGTALITSLNGLEDALDGKLGTRITK |
1E19 Chain:A ((2-314)) | GKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRV----------VPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEK--EQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGG-ERAIIAHLEKAVEALEGKTGTQVLP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1E19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -145773 for 2470 contacts (-59.0/contact) +
2D Compatibility (PS) -32257 + (NN) -13315 + (LL) 500
1D Compatibility (HY) -22400 + (ID) 6500
Total energy: -219745.0 ( -88.97 by residue)
QMean score : 0.514
|
|
|