Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENILDLWNQALAQIEKKLSKPSFETWMKSTKAHSLQGDTLTITAPNEFARDWLESRYLHLIADTIYELTGEELSIKFVIPQNQDVEDFMPKPQVKKAVKEDTSDFPQNMLNPKYTFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHYVIDHNPSAKVVYLSSEKFTNEFINSIRDNKAVDFRNR--YRNVDVLLIDDIQFLAGKEQTQ-------EEFFHTFNTLHEESKQIVISSDRPPKEIPTLEDRLRSRFEWGLITDITPPDLETRIAILRKKAKAEGLDIPNEVMLYIANQIDSNI-RELEGALIRVVAYSSLIN-----KDINADLAAEALKDIIPSSKPKVITIKEIQRVVGQQFNIKLEDFKAKKRTKSVAFPRQIAMYLSREMTDSSLPKIGEEFGGRDHTTVIHAHEKISKLLADDEQLQQHVKEIKEQLK |
| 3B9P Chain:A ((54-288)) | -----------------------------------------------------------------------------------------------------------------------------------------------AKGLLLFGPPGNGKTLLARAVATECS-----ATFLNISAASLTSKYVGDGEKL-VRALFAVARHMQPSIIFIDEVDSLLSER---EASRRLKTEFLVEFDGLP---RIVVLAATNRPQE---LDEAALRRFTK--RVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITDGYSGSDLTALAKDAALEPIRELNISAMRAITEQDFHSSLKRIRRSVAPQS---------L-NS-YEKWS-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87844 for 1506 contacts (-58.3/contact) +
2D Compatibility (PS) -21689 + (NN) -13679 + (LL) 17556
1D Compatibility (HY) -2800 + (ID) 2050
Total energy: -110506.0 ( -73.38 by residue)
QMean score : 0.497
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