Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKQGDTLSAIASQYRTTTNDITETNEIPNPDSLVVGQTIVIPIAGQFYDVKRGDTLTSIARQFNTTAAELARVNRIQLNTVLQIGFRLYIPPAPKRDIESNAYLEPRGNQVSENLQQAAREASPYLTYLGAFSFQAQRNGT-LV-APP----LTNLRS--ITESQNTTLMMIITNLENQAFSDELGRILLNDETVKRRLLNEIVENARRYGFRDIHFDFEYLRP-QDREAYNQFLREARDLFHREG-------LEISTALAPKTSATQQGRWYEAHDYRAHGEIVDFVVLMTYEWGYSGG---PPQAVSPIGPV------RDVIEYAL-TEMPANKIVMGQNLYGYDWTLPYTAGG-------TPARAVSPQQAIVIADQNNASIQYDQTAQAPFFRYTDAENRRHEVWFEDARSIQAKFNLIKELNLRGISYWKLGLSFPQNWLLLSDQFNVVKKTFR |
4URI Chain:A ((2-332)) | ---------------------------------------------------------------------------------------------------IKGGYWYSGSG------LAVSDINPSHFTHLFCAFADLDPNTNKLTISSSNAAAFSTFTQTVRAKNPSVKTLLSIGGGGGR-ALAAVFANMASQASRRKSFIDSSIQLARRNNFHGLDLDWEYPSSDIDKTNFASLIREWRAAVATESSTSGTPALLLSAAVGGSDQI----TPLKYYPGEAIANNLDWVNVMTYDLYTSDSYPTLTQPPAPLFYPRGIFSADEGITKWIQSGVPESKLALGLPFYGFKWRLSDPNNHGLFAPATQGLGAVKYKDIVNT----GGQVEFDSTYVTNYRFKG-----TDWYGYDDTQSISAKVAYAKQRGLFGYFAWHIEQDSNW--ALSETAS-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4URI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132009 for 2555 contacts (-51.7/contact) +
2D Compatibility (PS) -31858 + (NN) -14224 + (LL) 8612
1D Compatibility (HY) -8000 + (ID) 2600
Total energy: -180079.0 ( -70.48 by residue)
QMean score : 0.446
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