Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MICQECHERPATFHFTKVVNG--EKIEVHIC----EQCAKENSDSYGISANQGFSI---HNLLSGLLNMDSSFQ---NAGTQMFSHSEQ--ISACPKCGMTFQQFRKIGRFGCSECY----KTFHSNITPILRKV-HSGNTVHA-GKIPKR--------------IGGNLHVRRQ-IDMLKKELESLIHQEEFENAAHVRDQIRLLEQSLKSTDSEEEQE--------------------------------------------- |
| 4QCC Chain:A ((5-274)) | TKLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCA-TATEAFTALEAGAQALKIFPSSAFGPQYIKALKAVLPSDIAVFAVGGVTPENLAQWIDAGCAGAGLGSDLYRAGQSVERTAQQAAAFVKAYREAQKQKEQRQDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -47820 for 1258 contacts (-38.0/contact) +
2D Compatibility (PS) -19862 + (NN) -6868 + (LL) 208
1D Compatibility (HY) -2800 + (ID) 1600
Total energy: -78742.0 ( -62.59 by residue)
QMean score : 0.334
|
|
|