Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MNLQNNKGKFNKEQFCQLEDEQVIEKVHVGDSDALDYLITKYRNFVRAKARSYFLIGADREDIVQEGMIGLYKSIRDFKEDKLTSFKAFAELCITRQIITAIKTATRQKHIPLNSYASLDKPIFDEESDRTLLDVISGA--------KTLNPEEMIINQEEFDDIEMKMGELLSDLERKVLVLYLDGRSYQEISDELNRHVKSIDNALQRVKRKL--EKYLEIREISL----- |
| 3KLO Chain:A ((4-220)) | DENKLNVRMLSDVCMQSRLLKEALESKLPLA-LEITPFSELWLEE----NKPESRSIQMLVIDYSRI-----------------SDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQDEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIADKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KLO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51211 for 1378 contacts (-37.2/contact) +
2D Compatibility (PS) -20446 + (NN) 101 + (LL) 1648
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -79158.0 ( -57.44 by residue)
QMean score : 0.329
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