Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFI-KKQGAIPSFKGYNGFRGSICVSVNEELVHGIPGSRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSRYVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
4FO8 Chain:C ((3-248))
-VTIKTPDDIEKMRIAGRLAAEVLEMIGEHIKPGVTTEELDRICHDYIVNEQKAIPAPLNYKGFPKSICTSINHVVCHGIPNEKPLKEGDILNVDITVIKDGYHGDTSKMFLVGKTPEWADRLCQITQECMYKGISVVRPGAHLGDIGEIIQKHAEKNGFSVVREYCGHGIGKVFHEEPQVLHYGRAGTGIELKEGMIFTIEPMINQGRPETRLLGDGWTAITKDRKLSAQWEHTVLVTADGYEILT--
General information:
TITO was launched using:
RESULT:
Template:
4FO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87638 for 2151 contacts (-40.7/contact) +
2D Compatibility (PS) -27070 + (NN) -15041 + (LL) 500
1D Compatibility (HY) -18400 + (ID) 5450
Total energy: -153099.0 ( -71.18 by residue)
QMean score : 0.583
(partial model without unconserved sides chains):
PDB file :
Tito_4FO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FO8-query.scw
PDB file :
Tito_Scwrl_4FO8.pdb
: