Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRPVFPLILSAVLFLSCFFGARQTEASASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTDDYQKASP----KIPLMLSIDQEGGIVTRLGE-GTNFPGNMALGAARSRINAYQTGSIIGKELSALGINTDFSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQDIASALKHFPGHGDTDVDSHYGLPLVSHGQERLREVELYPFQKAIDAGA----DMVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADHFGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQTASIEQTIHDLIKRKKIKPVSLSKMNFASQVFKTEH---EKQVKEADYIITGSYVVKNDPVVNDGVIDDTISDSSKWATVFPRAVMKAALQHNKPFVLMSLRNPYDAANFEEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDIPSVTKPGNTLYPLGYGLNIKTGRPL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
| 4ZM6 Chain:A ((8-858)) | ------------------------------------------NLDKEIGQLLMCGFDG------------LEPTPGIIDLIENHNLGSIILFSRNIATPKQVQKLTHSLQQIARNAGHKRPLFIAVDQENGVVRRLGDSGTYLPGNMALGALGSSTAARNVAMAISKELLTLGMNWNLAPVLDVNNNPLNPVIGVRSYGQDPELVARMGLAQVEGYQRGKVATSIKHFPGHGDTATDSHLDVPVINKTLEELDKTELVPFKKALEAGGIACPTSVMVGHMLLPHFNKD------------VVSSIAPEIVRDLLRRRFGYKGVIITDCLEMDAVKETVGTPKGALMALQAGNDMAMISHTLA------FQKDAFKVLYSALQEGQLDKDEIRQSLQRVAQLKDQFLNWDDVLQQADLKTM-------GSEAHATLSKELYDRVPTVVTNRKNTLPIRPAQTDKILFLAAHVPEKEPFNSFHASLLKRHT---------NLEYIIYNEETPDLSQKIQEADWVIIGT------------------ANANLY--PFQVRMVQQAQKLAKRLVVAAVMNPYDQMCFPQVDTYLVTY--------EYTPPAHEAAVRLIFGEIETRSRLPISIPNVDDAIAPATFIVDDYRNDDDLDHVTAMWDDIFGKDWPLRKDKINLGLQRAKLQKHKVARDSQGKIVGFVATQIVVVDNKKHGQLMLLMVSPSYQGKGVGTLLHDAALEHFREQGADCIKLGSTYPRFFPGVPDDDAQSRKAQAFFSKKGWRMDDNLVHDLIGDLQDYKVPDKIQARMLKEKIWFGRIKPSETWELYAFQQRNFPHWLSTYQHHVELGDYQDLIVARQDDENGRVIASLILNTTHVSHEYRSDLIWTDDKLFGERSGGMACVGVAQEERGRGIGIGIVAHANWLLKQRGVTKSYVDWVELLDFYSRVGYKTWRSYRLGHF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -189476 for 4803 contacts (-39.4/contact) +
2D Compatibility (PS) -56888 + (NN) -23344 + (LL) 7844
1D Compatibility (HY) -40400 + (ID) 8850
Total energy: -311114.0 ( -64.77 by residue)
QMean score : 0.502
|
|
|