Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------------MNVNQNKKVLFLTDIENGLEPILQEATNTSAENMLTIQSYGASISHPYGEIMRSVIFAIYQEDVEEIFVVGTKDKKTSAGNGLTQLETMKDKIQTLDYLFQNCKPEFLGGTVDEWLNENSSDTIEKSVDMIRHHPLVPSYVKVRGLFVNHKGGKPSIAEVPDVKTGQAMPDHCLS
1G5C Chain:A ((2-170))
IIKDILRENQDFRFRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVD---DGVIRSAAVAIYALGDNEIIIVGH----TDCGMARLDEDLIVSRMRELGVEEEVIENFSIDVLNP---VGDEEENVIEGVKRLKSSPLIPESIGVHGLIIDINTGRLKPLYLDE-------------
General information:
TITO was launched using:
RESULT:
Template:
1G5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64288 for 1102 contacts (-58.3/contact) +
2D Compatibility (PS) -16717 + (NN) -6122 + (LL) 1188
1D Compatibility (HY) -8400 + (ID) 1350
Total energy: -95689.0 ( -86.83 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_1G5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G5C-query.scw
PDB file :
Tito_Scwrl_1G5C.pdb
: