Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKITTNEQFN-ELIQSDKEIIVKFYADWCPDCTRMNMFIGDILEEYNQN-DWYELNKDELPDLAEKYQVMGIPSLLIFKNGEKTAHLHSANAKTPEEVTEFLSEHIS
4KCA Chain:A ((9-109))-----TDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAA--TKVGALSKGQLKEFLDANLA


General information:
TITO was launched using:
RESULT:

Template: 4KCA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 400 -55923 -139.81 -564.88
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -139.81
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_4KCA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KCA-query.scw
PDB file : Tito_Scwrl_4KCA.pdb: