Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKSKVKMFFAAAIVWSACSSTGYAAAIEKEKHVSELRAEDLFVKKVEGMNKDFIKGADVSSVIALENSGVTFYNTNGKRQDIFTTLKQAGVNYVRVRIWNHPYDSNGNGYGGGNNDVQKAIEIGKRATANGMKVLADFHYSDFWADPAKQKVPKAWANLSFEAKKAKLYEYTKQSLQKMIKEGVDIGMVQVGNETTGGF----AGETDWTKMCQLFNEGSRAVRETN--SNILVALHFTNPETAGRYSFIAETLSKN----KVDYDVFASSYYPFW--HGTLQNLTSVLKAVANTYGKKVMVAETSYTYTAEDGDGHGNTAPKSGQTLPYPISVQGQATAVRDVMEAVANTGKAGLGVFYWEPAWIPVGPKTQIEKNKVLWETYGSGWASSYAAEYDPEDAGKWYGGSAVDNQALFDFNGHP-LPSLQVFQYAESGHIPKKR
1FOB Chain:A ((1-334))--------------------------------------------------ALTYRGADISSLLLLEDEGYSYKNLNGQTQALETILADAGINSIRQRVWVNPSD--------GSYDLDYNLELAKRVKAAGMSLYLDLHLSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPVVVVETNWPVSCPNPAY-----AFPSDLSSIPFSVAGQQEFLEKLAAVVEATTD-GLGVYYWEPAWIG-------------NAGLGSSC----------------------ADNLMVDYTTDEVYESIETLGEL---------


General information:
TITO was launched using:
RESULT:

Template: 1FOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1867 -10610 -5.68 -33.05
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -5.68
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_1FOB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FOB-query.scw
PDB file : Tito_Scwrl_1FOB.pdb: