Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQEKERILKLVEEGKLTAQEALTLIEKLDSDYKEKEEKITALSVHVHDEEEPFTTAKKESGKPSLGAKLFDWIDSAVKKVKEVDLDLNFGHAYDVQHIFQFKDTDFSSVELQIANGSVNIVPWEDDDIRAECQAKVYRADSQDAARHAFLQHIECEIKGNKFFIRTEKK-----TMKTNVTLYIPQKEYDKIRVKLFNGPVRGE-HLHVKEFSAK-TTNGVLSFSYLTAEKAIAET-ANGQIKLASHSCGTIEAETINGLIDLRGKSESIDVQS-FNGNIAINVTESDCRSIYAK-TTTGNVELAIPDDLAVKAELKSNLGTLSHELMDVEMLKEKNDTIQKEMMFTSNQAHDQNITVFSESLTGAIKLKYSQR
3PET Chain:A ((9-202))--------------------------------------------------------------------------------------------KKLITRDYK--VKEFNKIDAGT-VGNIYYTQSTDGKTDLQIYGPD-----------NIVALIQVAVKDNTLFLSIDKSKKVRNFKKMKITITSPT--LNGISF-KGVGDVHIENGLTTDNLDIESKGVGNVDIQSLTCQKLNVQSMGVGDVKLEG-------------------TAQIAALHSKGVGNIEAGNLR--ANAVEASSQGVGDITCNATESI--DAAV-RGVGSIKYK------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PET.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1095 -9186 -8.39 -49.92
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -8.39
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_3PET.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PET-query.scw
PDB file : Tito_Scwrl_3PET.pdb: