Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVR--TVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR
1X08 Chain:A ((19-240))
--------------------------------RHVAIIMAGNGRWAKKQG-KIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK-VQQGNLQPDQIDE---EMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRE-----
General information:
TITO was launched using:
RESULT:
Template:
1X08.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126952 for 1699 contacts (-74.7/contact) +
2D Compatibility (PS) -24119 + (NN) -9053 + (LL) 3140
1D Compatibility (HY) -14400 + (ID) 3750
Total energy: -175134.0 ( -103.08 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_1X08.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X08-query.scw
PDB file :
Tito_Scwrl_1X08.pdb
: