Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVANLKDLLAEGVSGRGVLVRSDLNVPLDEDGTITDAGRIIASAPTLKALLDADAKVVVAAHLGRPKDGPDPTLSLAPVAVALGEQLGRHVQLAGDVVGADALARAEGLTGGDILLLENIRFDKRE--TSKNDDDRRALAKQLV-----ELVGTGGVFVSDGFGVVHRKQASVYDIATLLPHYA-GTLVADEMRVLEQLTSSTQRPYAVVLGGSKVSDKLGVIESLATKADSIVIGGGMCFTFLAA-QGFSVGTSLLEDDMIEVCRGLLETYH----DVLRLPVDLVVTEKFAADSPPQTV-DVGAVPNGLMGLDIGPGSIKRFSTLLSNAGTIFWNGPMGVFEFPAYAAGTRGVAEAIVAATGKGAFSVVGGGDSAAAVRAMNIPEGAFSHISTGGGASLEYLEGKTLPGIEVLSREQPTGGVL |
| 1FW8 Chain:A ((4-344)) | ---------------------------------------------------------------------------SLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSM--VGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVV-LPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTD-KISHVSTGGGASLELLEGKELPGVAFLSEKK------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200433 for 2664 contacts (-75.2/contact) +
2D Compatibility (PS) -35183 + (NN) -13106 + (LL) 3868
1D Compatibility (HY) -24000 + (ID) 6600
Total energy: -275454.0 ( -103.40 by residue)
QMean score : 0.535
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