Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRVVVIGSGFAGLWAALGAARRLDELAVLAGTVDVMVVSNKPFHDIR-VRNYEADLSAC-RIPL-GDVLGPAGVAHVTA-EVTAIDADGRRVTTSTGASYSYDRLVLASGSHVVKP-ALPGLAEFGFDVDTYDGAVRLQQHLQGLAGGPLTSAAATVVVVGAGLTGIETACELPGRLHALFARGDGVTPRVVLIDHNPFVGSD-MGLSARPVIEQALLDNGVETRTGVSVAAVSPGGVTLSSGERLAAATVVWCAGMRAS-RLTEQLPVARDRLGRLQVDDYLRVIGVPAMFAAGDVAAARMDD-EH-LSVMSCQHGRPMGRYAGCNVINDLFDQPLLALRIPWYVTVLDLGSAGAVYTEGWERKVVSQGAPAKTTKQSINTRRIYPPLNGSRADLLAAAAPRVQPRP |
| 2GQW Chain:A ((7-308)) | KAPVVVLGAGLASVSFVAELRQAG-------YQGLITVVGDEAERPYDRPPLSKDFMAHGDAEKIRLDCKRAPEVEWLLGVTAQSFDPQAHTVALSDGRTLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGLR---------PQSRLLIVGGGVIGLELAATARTAG-----------VHVSLVETQPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACD--DGIFVDAYGRT-TCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDP----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220190 for 2417 contacts (-91.1/contact) +
2D Compatibility (PS) -31152 + (NN) -3962 + (LL) 6636
1D Compatibility (HY) -8400 + (ID) 3350
Total energy: -260418.0 ( -107.74 by residue)
QMean score : 0.394
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