Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MATSKVERLVNLVIALLSTRGYITAEKIRSSVAGYSD----------------SPSVEAFSRMFERDKNELRDLG----------IPLEVGRVSALEPTEGYRINRDAYALSPVELTPDEAAAVAVATQL-WESPELITATQGALLK-LRAAGVDVDPLDTGAPVAIASAAA--VSGL--RGSEDVLGIL-LSAIDSGQVVQFSHRSSRAEPYTVRTVEPWGVVTEKGRWYLVGHDRDRDATR------------VFRLSRIGAQVTPI----GPAGATTVPAGVDLRSIVAQKVTEVPTGEQATVWVAEG------RATALRRAGRSAGPRQLGGRDGEVIELEIRSSDRLAREITGYGAD---AIVL-QPGSLRDDVLARLRAQAGALA--------------------- |
| 4OFZ Chain:A ((85-513)) | QTVDDFKNLMYKMQETRRAIVFALLNEKD-LTKDDVEILKRAYEKLTDNFQREMCTLTTKLSVNIGDETRGLEKDLKYLDALMNIRREEPNLLWPIIMSRVDLFSILANYHPKGKETFLKEYEDTVKFLKTFISSEAITGKKPIFITDWDGTMKDYCSQYATNLQPVYSAVGMTRFAASFTRISAVLTAGPLRGPGILDLTAMPIDGPVMFSGSWGREWWLSGKRVVHQDGITDEGFNALQRLDDEMKDLLHTSPFALVGSGVQRKVDRLTLGVQTVCHHVTSELSNRYQMAVKERMHNSQILVFDPSTELEVEVVAHNSGIIWNKGNGVERLIKSLGD-SLQSPGKILICGDTLSDIPMVRQAVKQNPDGVLAIFVGAKMSLREEVKQVIGDESRCCFVSCPDVIHAAMSQILNEHCIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25340 for 2441 contacts (-10.4/contact) +
2D Compatibility (PS) -34397 + (NN) 405 + (LL) 192
1D Compatibility (HY) -11200 + (ID) 3250
Total energy: -73590.0 ( -30.15 by residue)
QMean score : 0.289
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