Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLGFWDIAVPIVGAPMAGGPSTPALAAAVSNAGGLGFVAGGYLSADRLADDIAAARAATTGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDDDWVRKLEVVADVRPEVVSFTFGAPPPDVVQRLSALGLLVSITVTSVYEAGVAIAAGADSLVVQGPAAGGHRGTFAPDMEPGTESLHQLLDRIGSAHDVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAPLGY--PE----VHQMTKPIRAAAVQADDPHGTNLWAGSAHRKTRPG-PAADIIASLTPDVCSA |
| 2Z6I Chain:A ((5-308)) | -ITELLKIDYPIFQGGMAW-VADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGVNIMLLSPF-----------------------------------VEDIVDLVIEEGVKVVTTGAGNP-SKYMERFHEAGIIVIPVVPSVALAKRMEKIGADAVIAEGMEAGGHIGKL---------TTMTLVRQVATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKILKARDIDTTISAQHFGHAVRAIKNQLTRDFELAEKDAFKQ-DLEIFEQMGAGALAKAV-VHGDVDGGSVMAGQIAGLVSKEETAEEILKDLYYGAAK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161968 for 2770 contacts (-58.5/contact) +
2D Compatibility (PS) -32495 + (NN) -21396 + (LL) 2508
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -230001.0 ( -83.03 by residue)
QMean score : 0.486
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