Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLS--GATLRRGAVAAVVAAG-TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV |
2IFT Chain:A ((13-195)) | -VRIIAGLWRGRKLPVL--------DRVKETLFNWLMPY--IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNL--AEQAISLLCENNWLKPNALIYVETEKDKPLI-TPENWTLLKEKTTGIVSYRLYQNLE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IFT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41001 for 1388 contacts (-29.5/contact) +
2D Compatibility (PS) -18121 + (NN) -4208 + (LL) 452
1D Compatibility (HY) 800 + (ID) 1050
Total energy: -63128.0 ( -45.48 by residue)
QMean score : 0.330
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