Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSD---------VDT-------DGLAKTVRLAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGN-VDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASG-DGHIVNISSLFGLIAVPGQSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVADGEDQQTFAEFFDRRLALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK |
3UVE Chain:C ((10-218)) | ----EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVEL--GQHMIRVNSVHPTHVKTPMLHN------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83204 for 1600 contacts (-52.0/contact) +
2D Compatibility (PS) -20902 + (NN) -8680 + (LL) 7480
1D Compatibility (HY) -11600 + (ID) 3600
Total energy: -120506.0 ( -75.32 by residue)
QMean score : 0.498
|
|
|