Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFA-RVLGDPALPHLFFVEGGALAVENALKAAFDWKS-RHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV----AFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEA----EGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSL-PTTADR-DELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT |
| 4JF1 Chain:B ((56-404)) | ----------------------------------------------------GKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATFAERVL---------FMNSGTEANETAFKLARHYACVRHS-------PFKTKIIAFHNAFHGQSLFTVSV-GGQPKYSDGFGPKPADIIHVPF---------------NDLHAVKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTSAKALGGGFPVSAMLT---TQEIA-SAFHVGSH-GSTYGGNPLACAVAGATFDIINTPEVLQGIHTKRQQFVQHLQA-IDEQFDIFS----DIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JF1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162054 for 2877 contacts (-56.3/contact) +
2D Compatibility (PS) -36578 + (NN) -17490 + (LL) 7608
1D Compatibility (HY) -21200 + (ID) 6200
Total energy: -235914.0 ( -82.00 by residue)
QMean score : 0.426
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