Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGGVLTLDAAFLGSVPADLGKALLERARADCGPVLHRAIESMREPLATMAGYHLGWWNADRSTAAGSSGKYFRAALVYAAAAACGGDVGDATPVSAAVELVHNFTLLHDDVMDGDATRRGRPTVWSVWGVGVAILLGDALHATAVRILTGLTDECV-AVRAIRRLQMSCLDLCIGQFEDCLLEGQ--PEVTVDDYLRMAAGKTAALT-GCCCALGALVANADDATIAALERFGHELGLAFQCVDDLIGIWGDPGVTGKPVGNDLARRKATLPVVAALNSRSEAA-TELAALYQAPA-AMTASDVERATALVKVAGGGHVAQRCADERIQAAIAA-------LPDAVRSPDLIALSQLICRREC |
| 1WMW Chain:A ((5-328)) | -----------------------PEAIRQALQERLLARLDHPDPLYRDLLQDYP-----------RRGGKMLRGLLTVYSALAHGAPLEAGLEAATALELFQNWVLVHDDIEDGSEERRGRPALHRLHPMPLALNAGDAMHAEMWGLLAEGLARGLFPPEVLLEFHEVVRRTAYGQHLDLLWTLGGTFDLRPEDYFRMVAHKAAYYTAVAPLRLGALLAGKTPP--AAYEEGGLRLGTAFQIVDDVLNLEGGE-AYGKERAGDLYEGKRTLILLRFLEEAPPEERARALALLALPREAKPEAEVGWLLERLLASRALAWAKAEAKRLQAEGLALLEAAFQDLPGKEALDHLRGLLAALVER-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167524 for 2630 contacts (-63.7/contact) +
2D Compatibility (PS) -33560 + (NN) -17402 + (LL) 2072
1D Compatibility (HY) -11600 + (ID) 4150
Total energy: -232164.0 ( -88.28 by residue)
QMean score : 0.451
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