Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPIGHPAA--IALADDAPIITPINSEFGKANRWHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRY---DYVTTKPLTAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTLLAGD-FVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG |
| 1OTJ Chain:B ((4-278)) | ---RLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQ-AITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKYRKTEEEHQRWREAVAKNPPLL--HPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKP-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OTJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -101572 for 2221 contacts (-45.7/contact) +
2D Compatibility (PS) -29418 + (NN) -14933 + (LL) 1636
1D Compatibility (HY) -13200 + (ID) 5300
Total energy: -162787.0 ( -73.29 by residue)
QMean score : 0.485
|
|
|