Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQLPRVGLGTDVHPIEPGRPCWLVGLLFPSADGCAGHSDGDVAVHALCDAVLSAAGLGDIGEVFGVDDPRWQGVSGADMLRHVVVLITQHGYRVGNAVVQVIGNRPKIGWRRLEAQAVLSRLLNAP---VSVSATTTDGLGLTGRGEGLAAIATALVVSLR
3K14 Chain:C ((25-178))
-----RIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHF----------DSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVV---
General information:
TITO was launched using:
RESULT:
Template:
3K14.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -130976 for 1198 contacts (-109.3/contact) +
2D Compatibility (PS) -15485 + (NN) -10980 + (LL) 656
1D Compatibility (HY) -8400 + (ID) 2950
Total energy: -168135.0 ( -140.35 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_3K14.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K14-query.scw
PDB file :
Tito_Scwrl_3K14.pdb
: