Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTARLRPELAGLPVYVPGKTVPGAIKLASNETVFGPLPSVRAAIDRATDTVNRYPDNGCVQLKAALARHLGPDFAPEHVAVGCGSVSLCQQLVQVTASVGDEVVFGWRSFELYPPQVRVAGAIPIQVPLTDHTFDLYAMLATVT-DRTRLIFVCNPNNPTSTVVGPDALARFVEAVPAHILIAIDEAYVEYIRDGMRPDSLGLVRAHNNVVVLRTFSKAYGLAGLRIGYAIGHPDVITALDKVYVPFTVSSIGQAAAIASLDAADELLARTDTVV-AERARVSAELRAAGFTLPPSQANFVWLPLGSR---TQDFVEQA-ADARIVVR-P---YGTDGVRVTVAAPEENDAFLRFARRWRSDQ |
| 4WBT Chain:A ((34-371)) | -------------------GRKIAARIGANESGFGPAPSVLLAIRQAAGDTWKYADPENHDLKQALARHL--GTSPANIAIGEGIDGLLGQIVRLVVEAGAPVVTSLGGYPTFNYHVAGHGGRLVTVPYADDREDLEGLLAAVGRENAPLVYLANPDNPMGSWWPAERVVAFAQALPETTLLVLDEAY-ETAPRDALPPIESL-IDKPNVIRARTFSKAYGLAGARIGYTLSTPGTAQAFDKIRNHFGMSRIGVAAAIAALADQD-YLKEVTLKIANSRQRIGRIAADSGLAPLPSATNFVAVDCGKDASYARAIVDRLMSDHGIFIRMPGVAPLNRCIRISTAPDAEMDLLAAALPEVIR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124066 for 2703 contacts (-45.9/contact) +
2D Compatibility (PS) -34518 + (NN) -12071 + (LL) 1532
1D Compatibility (HY) 9200 + (ID) 3000
Total energy: -162923.0 ( -60.27 by residue)
QMean score : 0.294
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