Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAILNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNVHKRIVVMDLSEDKSEPRVFINPEFEPLTEDMDQYQEGCLSVPGFYENVDRPQKVRIKALDRDGNPFEEVAEGLLAVCIQHECDHLNGKLFVDYLSTLKRDRIRKKLEKQHRQQA
4AZ4 Chain:A ((1-163))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETG-IEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDR---
General information:
TITO was launched using:
RESULT:
Template:
4AZ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68732 for 1274 contacts (-53.9/contact) +
2D Compatibility (PS) -17351 + (NN) -5546 + (LL) 712
1D Compatibility (HY) -18800 + (ID) 4650
Total energy: -114367.0 ( -89.77 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_4AZ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4AZ4-query.scw
PDB file :
Tito_Scwrl_4AZ4.pdb
: