Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRDLPSLNALRAFEAAARLHSISLAAEELHVTHGAVSRQVRLLEDDLGVALFGKDGRGVKLTDSGVRLRDACGDAFERLRGVCAELRRQTAEAPFVLGVPGSLLARWFIPRLDQLNRALPDLRLQLSTSEGEFDPRRPGLDAMLWFAEPPWPADMQVFELAPERMGPVVSPRLAQETGLAQAPAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVA-GLGVAIAPEPL-VRDDLAAGRLAAPWGFIETDARLALWV--PARLHDPRAGRLAQWLREQLAG |
2QSX Chain:A ((19-215)) | ---------------------------------------------------------------------------------------------ELLVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTGDGAVE-----SDLHVRCLPLSTH-YEYSQLLCEETLLLIGNTNL------------PISHYPFIPQTTRPQLWEQFKQENITYH-----SVGFEHFYLACEAV-RMEKGLALLP-DFMAQFSILRGDIQHIGNLKLHSGYGYYVVIPNFRLTSRKVALFHDWLKDKLT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QSX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115521 for 1308 contacts (-88.3/contact) +
2D Compatibility (PS) -18668 + (NN) -7199 + (LL) 8500
1D Compatibility (HY) -10400 + (ID) 1750
Total energy: -145038.0 ( -110.89 by residue)
QMean score : 0.512
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