Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQALGESLCEVLAGAVAGG-GEEGVQVSVEVREMERASYAKRVVARQR--
1OTG Chain:A ((1-125))
-PHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRVHWVDTWQMADGQHDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLALSFEIEELHPTLNFKQNNVHALFK
General information:
TITO was launched using:
RESULT:
Template:
1OTG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46348 for 785 contacts (-59.0/contact) +
2D Compatibility (PS) -13095 + (NN) -2770 + (LL) 208
1D Compatibility (HY) -6400 + (ID) 1650
Total energy: -70055.0 ( -89.24 by residue)
QMean score : 0.444
(partial model without unconserved sides chains):
PDB file :
Tito_1OTG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OTG-query.scw
PDB file :
Tito_Scwrl_1OTG.pdb
: