Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRA---------------NSAP-QWAAYPVYPAFRAKNNKVNTFAERLQGCFQF--SMNG--------------K--------V---PAAD-SPEIKALTVYAYWLASQA-PTGVSLPGRGYPDVAPPEGGYSIERGAKVYA-AQCAICHGADGQGQMA---LG----------------------------QTVFPPLWGAQS---FNWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI |
| 2VHD Chain:A ((27-305)) | -----------------------------------------SEQQRELGKKLFFDPRL-S---RSHVLSCNTCHNVGTGGADNVPTSVGHGWQKGPRNSPTVFNAVFNA-AQFW-DGRAKDLGEQAKGPIQNSVEMHSTPQLVEQTLGSIPEYVDAFRKAFPKAGKPVSFDNMALAIEAYEATLVTPDSPFDLYLKG------DDKALDAQQKKGLKAFMDSGCSACHNGINLGGQAYFPFGLVKKPDASVLPSGDKGRFAVTKTQSDEYVFRAAPLRNVALTAPYFHSGQVWELKDAVAIMGNAQLG---KQLAPDDVENIVAFLHSLSGKQPR------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VHD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55660 for 1490 contacts (-37.4/contact) +
2D Compatibility (PS) -20667 + (NN) -9706 + (LL) 3664
1D Compatibility (HY) 400 + (ID) 1950
Total energy: -83919.0 ( -56.32 by residue)
QMean score : 0.204
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