Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRALLLSGCLALVLLTQQAAAQTLLVVGDSISAALGLD------TSQGWVALLQKRLADEGYDYRVVNASISGDTSAGG----------LARLPALLA-EEKPALVVIELGGNDGLRGM---------APAQLQQNLASMAQKARAEGAKVLLLGIQLPPNY---------GPRYIEAFSRVYGAVAAQEKTALVPFFLEGVGGVQGMMQADGIHPALAAQPRLLENVWPTLKPLL
3DCI Chain:A ((23-230))
--------------------MKTVLAFGDSLTWGADPATGLRHPVEHRWPDVLEAELAG---KAKVHPEGLGGRTTCYDDHAGPACRNGARALEVALSCHMPLDLVIIMLGTNDIKPVHGGRAEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCVAGPGGEPAGGRDIEQSMRLAPLYRKLAAELGHHFFDAGSVA-----SASPVDGVHLDASATAAIGRALAAPVRDIL
General information:
TITO was launched using:
RESULT:
Template:
3DCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114414 for 1450 contacts (-78.9/contact) +
2D Compatibility (PS) -18976 + (NN) -10001 + (LL) 2640
1D Compatibility (HY) -5200 + (ID) 1750
Total energy: -147701.0 ( -101.86 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_3DCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DCI-query.scw
PDB file :
Tito_Scwrl_3DCI.pdb
: