Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNKNNLRYALGALALSVSAASLAAPSEAQQFTEFWTPGKPNPSICKSPLLVSTPLGLPRCLQ--ASNVVKRLQKLEDIASLNDGNRAAATPGYQASVDYVKQTLQKAGYKV---SVQPFPFTA---YYPKGPGSLSATVPQPVTYEWEKDFTYLSQTEAGDVTAKVVPVDLSLGAGNTSTSGCEAEDFANFPAGSIALIQRGTCNFEQKAENAAAAGAAGVIIFNQGNTDDRKGLENVTVGESYEGGIPVIFATYDNGVAWSQTPDLQLHLVVDVVRKKTETYNVVAETRRGNPNNVVMVGAHLDSVFEGPGINDNGSGSAAQLEMAVLLAKALPVNKVRFAWWGAEEAGLVGSTHYVQNLAPEEKKKIKAYLNFDMIGSPNFGNFIYDGDGSDFGLQGPPGSAAIERLFEAYFRLRGQQSEGTE-IDFRSDYAEFFNSG--IAFGGLFTGAEGLKTEEQAQKYGGTAGKAYDECYHSKCDGIANINQDALEIHSDAMAFVTSWLSLSTKVVDDEIAAAGQKAQSRSLQMQKSASQIERWGHDFIK |
| 3K9T Chain:A ((7-369)) | --------------------------------------------------------KYIQNSSETGGEIYNLIEELF------PICRSITGNGVRKTMDIIRKHI-PLEIHEVKSGTKVFDWTVPKEWNIKD-AYVRNSKGEKVIDFKENNLHVMSYS---------VPVHKTMT----------LDE----LKPYL---------------HTIPGNKDRIPYLTSY------YKENWGFSLTQNKFDELCDD--------------DYEVVIDSSLEDGSLTYGEYYIRGE-LEEEILLTTYTCHPS---MCNDNLSGVALITFIAKALSKLKTKYSYRFLFA----PETIGSITWLSRNED-KLKNIKMGLVATCVGDAGIKNYKRTK----------FGDAEIDKIVEKVLMHCGSEYYVADFFPWGSDERQFSSPGINLSVGSLMRSC------------------YGFDGYHTSADNLCYMNKDGLADSYKTYLEVIYTIENN-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86037 for 2932 contacts (-29.3/contact) +
2D Compatibility (PS) -36035 + (NN) -15061 + (LL) 9344
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -140939.0 ( -48.07 by residue)
QMean score : 0.332
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