Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSAVIRVDSLNKTFAR-----KQALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQ----QFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLADFAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGS-SEYLSEGFLNELYGAEGDTPLLFSDRARRGAESQPELTLARA |
4HLU Chain:B ((5-230)) | ----IEVVNVSHIFHRGTPLEKKALENVSLVINEGECLLVAGNTGSGKSTLLQIVAGLIEP---TSGDVLYDGERKKGY-----EIRR---NIGIAFQYPEDQF-FAER--VFDEVAFAVKNFYPD-RDPVPLV-----KKAMEFVG-LDFDSFKDRVPFFLSGGEKRRVAIASVIVHEPDILILDEPLVGLDREGKTDLLRIVEKW-KTLGKTVILISHDIETVINHVDRVVVLEKGKKVFDGTRMEFLEK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164599 for 1734 contacts (-94.9/contact) +
2D Compatibility (PS) -22900 + (NN) -1611 + (LL) 3352
1D Compatibility (HY) -20000 + (ID) 3850
Total energy: -209608.0 ( -120.88 by residue)
QMean score : 0.559
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