Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLG------SGQPEQDAKVLTSIILQMEYQGLVDGVE----QLAVDEMRAILRRYLNLVMGL
3F0C Chain:A ((10-200))
---------------------------------DGKLELIINAAQKRFAHYGLCKTTMNEIASDVGMGKASLYYYFPDKETLFEAVIKKEQNVFFDEMDKILNS------------------GIDATALLKKYVKLRSLHFRH-LLNLSKLRSDF-----TKPVFAKAFESFKQKEVEIVAGIIQYGITTKEFKRGNKHENAEFLVHLLLGVRMVKLKYKEINDFDESDYEDLDKNMCKVAGMFL--
General information:
TITO was launched using:
RESULT:
Template:
3F0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106692 for 1246 contacts (-85.6/contact) +
2D Compatibility (PS) -19537 + (NN) -12885 + (LL) 4216
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -138248.0 ( -110.95 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_3F0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0C-query.scw
PDB file :
Tito_Scwrl_3F0C.pdb
: