Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFERVREDIQSVFHRDPAARNALEVLTCYPGLHAVWLHRLAHGLWTSGWKWLARLVSNFGRWMTGIEIHPGARIGRRFFIDHGMGIVIGETAEIGDDVTLYQGVTLGGTTWNKGKRHPTLGNNVVVGAGAKVLGPFTVGEGAKVGSNAVVTKEVPPGATVVGIPGRIIMREDSEQQAKRQAMAEKLGFDAYGVSQDMPDPVARAIGQLLDHLQAVDGRLEGMCQALTALGSDYCAKDLPVLREEDFAGVKDEDGNPAA
4N69 Chain:B ((95-255))
-------DLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIANVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLV------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4N69.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125862 for 1320 contacts (-95.3/contact) +
2D Compatibility (PS) -17697 + (NN) -11677 + (LL) 6436
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -163100.0 ( -123.56 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_4N69.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N69-query.scw
PDB file :
Tito_Scwrl_4N69.pdb
: