Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSTPKRVLLAGATGLTGEHLLDRILSEP--TLAKVIAPARKALAEHPRLDNPVGPLAEL--LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKS----SIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLA------------------------EILAAPIARIL--PGKYHGIEA------CDLARALWRLALEEGKGVRFVESDELRKLGK------------------------------------------------- |
| 2WM3 Chain:A ((4-299)) | ---DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWESCS---QEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKLGFPGARDLANMFRFYALRPDRDIELTLRLNPKALTLDQWLEQHKGDFNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79135 for 1566 contacts (-50.5/contact) +
2D Compatibility (PS) -22863 + (NN) -12122 + (LL) 604
1D Compatibility (HY) 800 + (ID) 1700
Total energy: -114416.0 ( -73.06 by residue)
QMean score : 0.354
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