Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQTLLKLLQDGRFHSGEELGAVLGISRSAVWKRLQHLEAEHGLQFHKVRGRGYRLASPLSLLDPRKIDSLWPVEIMPTVDSTNSEAMRRLAAGASTPFVIVAEQQTAGRGRRGRAWVSPYGENLYYSLAITVRGGARELEGLSLVVGLAVLRALESLGVQDTGLKWPNDLLQGGKKIAGILLELSGDPADLCHVVIGIGINVNMKTATDIGQPWTSLREALGELVDRSRLLSALNRQLADYLDRHSREGFAASREEWESC--NLWQGAQV-ILSTALSSIEGRVLGVDSRGALRLEVDGVE-QGFSGGELSLRLRQ |
1X01 Chain:B ((36-234)) | --------------------------------------------------------------------------------------------------VIVADKQTMGHGRLNRKWESPEG-GLWLSIVLSPKVPQKDLPKIVFLGAVGVVETLKEFSI-DGRIKWPNDVLVNYKKIAGVLVEGKGD-----KIVLGIGLNVNNKVPNGA----TSMKLELGSEVP---LLSVF-RSLITNLDRLYLNFLKNPMDILNLVRDNMILGVRVKILGDG--SFEGIAEDIDDFGRLIIRLDSGEVKKVIYGDVSLRF-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1X01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120855 for 1508 contacts (-80.1/contact) +
2D Compatibility (PS) -20522 + (NN) -5297 + (LL) 7528
1D Compatibility (HY) -18400 + (ID) 3650
Total energy: -161196.0 ( -106.89 by residue)
QMean score : 0.451
|
|
|